JSLHR-S-18-0006nalborczyk_SuppS1.pdf (810.51 kB)
Introducing brms (Nalborczyk et al., 2019)
journal contributionposted on 2019-05-14, 15:30 authored by Ladislas Nalborczyk, Cédric Batailler, Hélène Loevenbruck, Anne Vilain, Paul-Christian Bürkner
Purpose: Bayesian multilevel models are increasingly used to overcome the limitations of frequentist approaches in the analysis of complex structured data. This tutorial introduces Bayesian multilevel modeling for the specific analysis of speech data, using the brms package developed in R.
Method: In this tutorial, we provide a practical introduction to Bayesian multilevel modeling by reanalyzing a phonetic data set containing formant (F1 and F2) values for 5 vowels of standard Indonesian (ISO 639-3:ind), as spoken by 8 speakers (4 females and 4 males), with several repetitions of each vowel.
Results: We first give an introductory overview of the Bayesian framework and multilevel modeling. We then show how Bayesian multilevel models can be fitted using the probabilistic programming language Stan and the R package brms, which provides an intuitive formula syntax.
Conclusions: Through this tutorial, we demonstrate some of the advantages of the Bayesian framework for statistical modeling and provide a detailed case study, with complete source code for full reproducibility of the analyses (https://osf.io/dpzcb/).
Supplemental Material S1. Moderation analysis; lognormal and skew-normal models; session information.
Nalborczyk, L., Batailler, C., Loevenbruck, H., Vilain, A., & Bürkner, P.-C. (2019). An introduction to Bayesian multilevel models using brms: A case study of gender effects on vowel variability in standard Indonesian. Journal of Speech, Language, and Hearing Research, 62, 1225–1242. https://doi.org/10.1044/2018_JSLHR-S-18-0006
The first author of the tutorial is funded by a fellowship from Univ. Grenoble Alpes.
speechtutorialstatisticsintroductionBayesianmultilevelmodelbrmscase studygendereffectsvowelvariabilityIndonesianstandardlimitationsanalysiscomplexdatastructuredphoneticformantrepetitionsoverviewframworkmodelingfittedprobabilisticprogramminglanguageStanR packageformulasyntaxsource codeLinguistic Processes (incl. Speech Production and Comprehension)Statistics